Année 2021

Allioux, M., Jebbar, M., Slobodkina, G., Slobodkin, A., Moalic, Y., Frolova, A., Shao, Z., Alain, K. (2021). Complete genome sequence of Thermosulfurimonas marina sp. nov., an anaerobic thermophilic chemolithoautotrophic bacterium isolated from a shallow hydrothermal vent. Marine Genomics, 55, 100800. doi. org/10.1016/j.margen.2020.100800.

Brandt, M., Trouche, B., Quintric, L., Günther, B., Wincker, P., Poulain, J., Arnaud‐haond, S. Bioinformatic pipelines combining denoising and clustering tools allow for more comprehensive prokaryotic and eukaryotic metabarcoding. Molecular Ecology Resources. In press. doi.org/10.1111/1755-0998.13398

Brandt, M., Pradillon, F., Trouche, B., Henry, N., Liautard-Haag, C., Cambon-Bonavita, M-A., Cueff-Gauchard, V., Wincker, P., Belser, C., Poulain, J., Arnaud-Haond S., Zeppilli, D. (2021). Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA. Scientific Reports, 11(1), 7856 (14p.). Publisher's official version : doi.org/10.1038/s41598-021-86396-8 , Open Access version : https://archimer.ifremer.fr/doc/00689/80094/

Cambon-Bonavita, M.A., Aubé, J., Cueff-Gauchard, V., Reveillaud, J. Niche partitioning in the Rimicaris exoculata holobiont: the case of the first symbiotic Zetaproteobacteria. Microbiome 9, 87 (2021). doi.org/10.1186/s40168-021-01045-6

Cozannet, M., Borrel, G., Roussel, E., Moalic, Y., Allioux, M., Sanvoisin, A., Toffin, L.Alain, K. (2021). New Insights into the Ecology and Physiology of Methanomassiliicoccales from Terrestrial and Aquatic Environments. Microorganisms, 9(1), 30. doi.org/10.3390/microorganisms9010030.

François, D., X., Godfroy, A., Mathien, C., Aubé J., Cathalot, C., Lesongeur, F., L’Haridon, S., Philippon, X., Roussel, E., G. (2021). Persephonella atlantica sp. nov.: How to adapt to physico-chemical gradients in high temperature hydrothermal habitats. Systematic and Applied Microbiology, SYAPM 126176, Volume 44, Issue 1, January 2021, 126176, doi:1016/j.syapm.2020.12617

Eren A. M., Kiefl E., Shaiber A., Veseli I., Miller S. E., Schechter M. S., Fink I., Pan J. N., Yousef M., Fogarty E. C., Trigodet F., Watson A. R., Esen O. C., Moore R. M., Clayssen Q., Lee M. D., Kivenson V., Graham E. D., Merrill B. D., Karkman ., Blankenberg D., Eppley J. M., Sjödin A., Scott J. J., Vasquez-Campos X., McKay L. J., McDaniel E. A., Stevens S. L. R., Aderson R. E., Fuesel J., Fernandez-uerra A., Maignien L., Delmont T. O., Willis A. D. (2021). Community-led, integrated, reproducible multi-omics with anvi’o. Nature Microbiology, 6(1), 3-6. doi.org/10.1038/s41564-020-00834-3

Klasek, S.A., Brock, M.T. , Morrison, H.G., Weinig, C., Maignien, L. (2021). Soil Microsite Outweighs Cultivar Genotype Contribution to Brassica Rhizobacterial Community Structure. Front Microbiol  2021 Apr 7;12:645784. doi: 10.3389/fmicb.2021.645784

Zeng, X., Alain, K., & Shao, Z. (2021), Microorganisms inhabiting deep-sea hydrothermal vents. Marine Life Science & Technology (2096-6490) (Springer Science and Business Media LLC), Vol. 3 , P. 204-230. https://doi.org/10.1007/s42995-020-00086-4. DOI:  10.3389/fmicb.2021.645784