Publications produced by Clonix partners during the project

1.    Barres, B., C. Dutech, A. Andrieux, F. Halkett, and P. Frey (2012) Exploring the role of asexual multiplication in poplar rust epidemics: impact on diversity and genetic structure. Mol Ecol. 21(20): p. 4996-5008.
2.    Masucci, A., S. Arnaud-Haond, V. Eguíluz, E. Hernández-García, and E. Serrão (2012) Genetic flow directionality and geographical segregation in a Cymodocea nodosa genetic diversity network. EPJ Data Science. 1(1): p. 1-11.
3.    Xhaard, C., B. Barres, A. Andrieux, L. Bousset, F. Halkett, and P. Frey (2012) Disentangling the genetic origins of a plant pathogen during disease spread using an original molecular epidemiology approach. Mol Ecol. 21(10): p. 2383-98.
4.    Massa, S.I., C.M. Paulino, E.A. Serrao, C.M. Duarte, and S. Arnaud-Haond (2013) Entangled effects of allelic and clonal (genotypic) richness in the resistance and resilience of experimental populations of the seagrass Zostera noltii to diatom invasion. Bmc Ecology. 13.

5.    Murat, C., A. Rubini, C. Riccioni, H. De la Varga, E. Akroume, B. Belfiori, . . . F. Paolocci (2013) Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes. New Phytol. 199(1): p. 176-87.
6.    Arnaud-Haond, S., Y. Moalic, C. Barnabé, F.J. Ayala, and M. Tibayrenc (2014) Discriminating Micropathogen Lineages and Their Reticulate Evolution through Graph Theory-Based Network Analysis: The Case of <italic>Trypanosoma cruzi</italic>, the Agent of Chagas Disease. PLoS ONE. 9(8): p. e103213.

7.    Arnaud-Haond, S., Y. Moalic, E. Hernandez-Garcia, V.M. Eguiluz, F. Alberto, E.A. Serrao, and C.M. Duarte (2014) Disentangling the Influence of Mutation and Migration in Clonal Seagrasses Using the Genetic Diversity Spectrum for Microsatellites. Journal of Heredity. 105(4): p. 532-541.
8.    Becheler, R., E. Benkara, Y. Moalic, C. Hily, and S. Arnaud-Haond (2014) Scaling of processes shaping the clonal dynamics and genetic mosaic of seagrasses through temporal genetic monitoring. Heredity. 112(2): p. 114-121.
9.    Dia, A., L. Guillou, S. Mauger, E. Bigeard, D. Marie, M. Valero, and C. Destombe (2014) Spatiotemporal changes in the genetic diversity of harmful algal blooms caused by the toxic dinoflagellate Alexandrium minutum. Molecular Ecology. 23(3): p. 549-560.
10.    Kivelä, M., S. Arnaud-Haond, and J. Saramäki (2014) EDENetworks: A user-friendly software to build and analyse networks in biogeography, ecology and population genetics. Molecular Ecology Resources: p. n/a-n/a.
11.    Stoeckel, S. and J.P. Masson (2014) The exact distributions of F(IS) under partial asexuality in small finite populations with mutation. PLoS One. 9(1): p. e85228.

12.Sere, M., J. Kabore, V. Jamonneau, A. M. G. Belem, F. J. Ayala, and T. De Meeus. 2014. Null allele, allelic dropouts or rare sex detection in clonal organisms: simulations and application to real data sets of pathogenic microbes. Parasite Vector 7.